MLOC_70487 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains21.545317.5222.193623.9198
LEAShoots from the seedlings (10 cm shoot stage)9.7367316.468522.34716.2837
INF1Young developing inflorescences (5mm)0.1113520.04377220.02381070.0582571
INF2Developing inflorescences (1-1.5 cm)0.02075750.01949190.0251890.0296678
ROORoots from the seedlings (10 cm shoot stage)60.497852.585945.339775.856
NODDeveloping tillers at six leaf stage, 3rd internode0.3336860.15228300.53435
CAR5Developing grain, bracts removed (5 DPA)2.358972.893762.59783.34933
CAR15Developing grain, bracts removed (15 DPA)3.382724.669773.0706311.4884



CDS Structure of MLOC_70487






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70487.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_70487.1CUST_17817_PI427708080AvailableAvailablecontig_58060 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g61460.1 +2 0.0 692 333/437 (76%) 13101.m06543 protein leaf senescence related protein, putative, expressed
TAIR PP10 AT3G55990.1 +2 1e-164 478 219/352 (62%) | Symbols: ESK1, TBL29 | Plant protein of unknown function (DUF828) | chr3:20780410-20782931 FORWARD LENGTH=487