- Predicted Gene MLOC_70487
MLOC_70487 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 21.5453 | 17.52 | 22.1936 | 23.9198 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 9.73673 | 16.4685 | 22.347 | 16.2837 |
INF1 | Young developing inflorescences (5mm) | 0.111352 | 0.0437722 | 0.0238107 | 0.0582571 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0207575 | 0.0194919 | 0.025189 | 0.0296678 |
ROO | Roots from the seedlings (10 cm shoot stage) | 60.4978 | 52.5859 | 45.3397 | 75.856 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.333686 | 0.152283 | 0 | 0.53435 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.35897 | 2.89376 | 2.5978 | 3.34933 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.38272 | 4.66977 | 3.07063 | 11.4884 |
CDS Structure of MLOC_70487
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_70487.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g61460.1 |
+2 |
0.0 |
692 |
333/437 (76%) |
13101.m06543 protein leaf senescence related protein, putative, expressed |
TAIR PP10 |
AT3G55990.1 |
+2 |
1e-164 |
478 |
219/352 (62%) |
| Symbols: ESK1, TBL29 | Plant protein of unknown function (DUF828) | chr3:20780410-20782931 FORWARD LENGTH=487 |