MLOC_70482 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.73025.70084.93850
LEAShoots from the seedlings (10 cm shoot stage)1.19151.992522.556230
INF1Young developing inflorescences (5mm)0.1331930.1103580.08996130
INF2Developing inflorescences (1-1.5 cm)0.1770310.04264560.1401760
ROORoots from the seedlings (10 cm shoot stage)5.346823.4390411.61720
NODDeveloping tillers at six leaf stage, 3rd internode1.253852.173121.794380
CAR5Developing grain, bracts removed (5 DPA)0.3637520.3279710.2635360
CAR15Developing grain, bracts removed (15 DPA)0.1984160.2569180.1216370



CDS Structure of MLOC_70482






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70482.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_70482.1CUST_15537_PI427708080AvailableNonecontig_58048 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g01840.1 -2 1e-145 455 257/333 (77%) 13106.m00098 protein nodulin, putative, expressed
TAIR PP10 AT3G30340.1 -2 1e-58 209 118/319 (37%) nodulin MtN21 /EamA-like transporter family protein | chr3:11956626-11958969 FORWARD LENGTH=364