- Predicted Gene MLOC_70481
MLOC_70481 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 126.414 | 85.6498 | 86.6915 | 103.944 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 46.5874 | 48.4612 | 60.0873 | 43.8033 |
| INF1 | Young developing inflorescences (5mm) | 46.7072 | 53.2804 | 53.8098 | 50.4614 |
| INF2 | Developing inflorescences (1-1.5 cm) | 65.6918 | 60.4425 | 64.8224 | 78.9993 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 133.645 | 107.393 | 100.708 | 133.813 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 58.2451 | 75.9334 | 61.653 | 205.358 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 98.3112 | 112.004 | 98.9875 | 117.985 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 56.6661 | 58.8165 | 49.8523 | 152.593 |
CDS Structure of MLOC_70481
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_70481.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g26910.1 |
-2 |
4e-78 |
241 |
138/169 (82%) |
13111.m02578 protein SKP1-like protein 1B, putative, expressed |
| TAIR PP10 |
AT5G42190.1 |
-2 |
1e-70 |
221 |
122/167 (73%) |
| Symbols: ASK2, SKP1B | E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein | chr5:16854495-16855516 REVERSE LENGTH=171 |