- Predicted Gene MLOC_70480
MLOC_70480 FPKM values
FPKM by Treatment | FPKM by Replicate |
There are no FPKM-by-treatment values calculated for this gene.
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|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 6.07051 | 4.54659 | 4.57596 | 0 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 54.3114 | 112.436 | 107.892 | 0 |
INF1 | Young developing inflorescences (5mm) | 1.56289 | 1.45276 | 0.877341 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.948945 | 1.03717 | 1.396 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.23553 | 1.61843 | 3.91763 | 0 |
NOD | Developing tillers at six leaf stage, 3rd internode | 25.2542 | 29.7435 | 19.4831 | 0 |
CAR5 | Developing grain, bracts removed (5 DPA) | 10.8454 | 15.1728 | 13.8559 | 0 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.81759 | 2.84135 | 1.7783 | 0 |
CDS Structure of MLOC_70480
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_70480.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g01850.1 |
+3 |
0.0 |
549 |
259/286 (91%) |
13106.m00100 protein ferredoxin--NADP reductase, chloroplast precursor, putative, expressed |
TAIR PP10 |
AT1G20020.3 |
+3 |
4e-172 |
518 |
242/285 (85%) |
| Symbols: ATLFNR2 | ferredoxin-NADP(+)-oxidoreductase 2 | chr1:6942851-6944868 FORWARD LENGTH=369 |