MLOC_70480 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.070514.546594.575960
LEAShoots from the seedlings (10 cm shoot stage)54.3114112.436107.8920
INF1Young developing inflorescences (5mm)1.562891.452760.8773410
INF2Developing inflorescences (1-1.5 cm)0.9489451.037171.3960
ROORoots from the seedlings (10 cm shoot stage)2.235531.618433.917630
NODDeveloping tillers at six leaf stage, 3rd internode25.254229.743519.48310
CAR5Developing grain, bracts removed (5 DPA)10.845415.172813.85590
CAR15Developing grain, bracts removed (15 DPA)1.817592.841351.77830



CDS Structure of MLOC_70480






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70480.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367092NoneNoneNoneNone
MLOC_70480.1CUST_18397_PI427708080AvailableNonecontig_58048 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g01850.1 +3 0.0 549 259/286 (91%) 13106.m00100 protein ferredoxin--NADP reductase, chloroplast precursor, putative, expressed
TAIR PP10 AT1G20020.3 +3 4e-172 518 242/285 (85%) | Symbols: ATLFNR2 | ferredoxin-NADP(+)-oxidoreductase 2 | chr1:6942851-6944868 FORWARD LENGTH=369