- Predicted Gene MLOC_70474
MLOC_70474 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_70474_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_70474_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 8.61837 | 25.6577 | 17.7587 | 18.6405 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 16.339 | 10.7235 | 11.115 | 10.3468 |
INF1 | Young developing inflorescences (5mm) | 55.9463 | 54.565 | 49.3522 | 44.3371 |
INF2 | Developing inflorescences (1-1.5 cm) | 80.6899 | 58.9768 | 50.458 | 70.0407 |
ROO | Roots from the seedlings (10 cm shoot stage) | 5.95871 | 17.941 | 11.7727 | 17.6829 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.82035 | 2.81899 | 11.2864 | 13.1311 |
CAR5 | Developing grain, bracts removed (5 DPA) | 25.4467 | 24.4784 | 24.0102 | 24.1962 |
CAR15 | Developing grain, bracts removed (15 DPA) | 8.06543 | 9.66369 | 6.84775 | 20.0559 |
CDS Structure of MLOC_70474
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_70474.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g49230.1 |
-1 |
0.0 |
640 |
347/409 (85%) |
13105.m05265 protein ribosomal RNA large subunit methyltransferase J, putative, expressed |
TAIR PP10 |
AT4G25730.1 |
-1 |
4e-154 |
464 |
248/412 (60%) |
FtsJ-like methyltransferase family protein | chr4:13102906-13106718 REVERSE LENGTH=821 |