- Predicted Gene MLOC_70473
MLOC_70473 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 21.2166 | 22.582 | 19.5822 | 26.7656 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 17.7369 | 11.5115 | 12.7358 | 14.6899 |
INF1 | Young developing inflorescences (5mm) | 55.6255 | 55.7336 | 55.0866 | 58.1231 |
INF2 | Developing inflorescences (1-1.5 cm) | 76.5479 | 55.8382 | 57.0082 | 85.5958 |
ROO | Roots from the seedlings (10 cm shoot stage) | 7.19331 | 20.1149 | 15.8849 | 32.4314 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.90514 | 4.35906 | 12.0528 | 26.9629 |
CAR5 | Developing grain, bracts removed (5 DPA) | 29.8951 | 29.2875 | 28.1243 | 37.3966 |
CAR15 | Developing grain, bracts removed (15 DPA) | 10.4598 | 10.7295 | 8.77699 | 29.486 |
CDS Structure of MLOC_70473
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_70473.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g49230.1 |
-3 |
2e-145 |
442 |
267/342 (78%) |
13105.m05265 protein ribosomal RNA large subunit methyltransferase J, putative, expressed |
TAIR PP10 |
AT4G25730.1 |
-3 |
1e-73 |
252 |
171/347 (49%) |
FtsJ-like methyltransferase family protein | chr4:13102906-13106718 REVERSE LENGTH=821 |