MLOC_70444 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1889740.7404540.3972410.531151
LEAShoots from the seedlings (10 cm shoot stage)6.8176215.21521.708912.9056
INF1Young developing inflorescences (5mm)0.2178190.2644010.1609390.188939
INF2Developing inflorescences (1-1.5 cm)0.077621600.03420890.0574927
ROORoots from the seedlings (10 cm shoot stage)3.474492.543970.9831133.2791
NODDeveloping tillers at six leaf stage, 3rd internode0.5319110.286710.203041.01574
CAR5Developing grain, bracts removed (5 DPA)5.291986.226456.870316.3882
CAR15Developing grain, bracts removed (15 DPA)0.6640270.7766910.7319261.66096



CDS Structure of MLOC_70444






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70444.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK353932NoneNoneNoneNone
AK369793NoneNoneNoneNone
MLOC_70444.1CUST_5904_PI427708080AvailableAvailablecontig_57985 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g51430.2 +1 2e-159 459 219/296 (74%) 13103.m05591 protein SEC14 cytosolic factor family protein, putative, expressed
TAIR PP10 AT1G75170.2 +1 3e-104 317 149/287 (52%) Sec14p-like phosphatidylinositol transfer family protein | chr1:28214405-28215686 FORWARD LENGTH=296