- Predicted Gene MLOC_70429
MLOC_70429 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 54.7898 | 48.1696 | 52.8584 | 48.7847 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 57.004 | 58.1822 | 71.948 | 48.4616 |
INF1 | Young developing inflorescences (5mm) | 33.3003 | 36.3952 | 34.6288 | 28.8528 |
INF2 | Developing inflorescences (1-1.5 cm) | 26.3071 | 31.3396 | 30.9976 | 31.4582 |
ROO | Roots from the seedlings (10 cm shoot stage) | 79.5642 | 76.2935 | 71.6078 | 80.9544 |
NOD | Developing tillers at six leaf stage, 3rd internode | 72.41 | 64.5648 | 48.1617 | 167.053 |
CAR5 | Developing grain, bracts removed (5 DPA) | 46.336 | 49.6488 | 43.9696 | 43.8659 |
CAR15 | Developing grain, bracts removed (15 DPA) | 15.4458 | 15.7322 | 13.7124 | 35.3203 |
CDS Structure of MLOC_70429
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_70429.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g44050.1 |
+3 |
4e-137 |
413 |
202/206 (98%) |
13105.m04647 protein ras-related protein, putative, expressed |
TAIR PP10 |
AT3G18820.1 |
+3 |
1e-121 |
372 |
184/205 (90%) |
| Symbols: ATRABG3F, ATRAB7B, RAB71, RABG3F, RAB7B | RAB GTPase homolog G3F | chr3:6484266-6486005 FORWARD LENGTH=206 |