MLOC_70404 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.54066.938956.948447.112
LEAShoots from the seedlings (10 cm shoot stage)15.508618.104716.954215.5067
INF1Young developing inflorescences (5mm)10.796214.922914.594712.1132
INF2Developing inflorescences (1-1.5 cm)17.971216.799215.470719.4143
ROORoots from the seedlings (10 cm shoot stage)11.936915.391112.074219.4337
NODDeveloping tillers at six leaf stage, 3rd internode12.586119.295314.69266.9566
CAR5Developing grain, bracts removed (5 DPA)8.210667.514698.025968.07335
CAR15Developing grain, bracts removed (15 DPA)6.433566.653275.5853515.2511



CDS Structure of MLOC_70404






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70404.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371562NoneNoneNoneNone
MLOC_70404.1CUST_5896_PI427708080AvailableAvailablecontig_5791 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g43270.1 -3 0.0 1082 519/632 (82%) 13106.m04529 protein protein kinase domain containing protein, expressed
TAIR PP10 AT4G32250.3 -3 0.0 684 333/585 (57%) Protein kinase superfamily protein | chr4:15570285-15572528 REVERSE LENGTH=611