MLOC_70403 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.762024.344685.126155.04557
LEAShoots from the seedlings (10 cm shoot stage)3.563573.738073.667673.3691
INF1Young developing inflorescences (5mm)8.975959.3308410.12518.58906
INF2Developing inflorescences (1-1.5 cm)6.968048.757138.316089.36102
ROORoots from the seedlings (10 cm shoot stage)6.31715.566336.676277.57768
NODDeveloping tillers at six leaf stage, 3rd internode1.957123.160254.512.0325
CAR5Developing grain, bracts removed (5 DPA)6.49145.838056.405476.44201
CAR15Developing grain, bracts removed (15 DPA)2.395412.380712.205175.83011



CDS Structure of MLOC_70403






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70403.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375424NoneNoneNoneNone
MLOC_70403.2CUST_5895_PI427708080AvailableAvailablecontig_5791 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g43280.1 +2 7e-108 326 173/210 (82%) 13106.m04530 protein paxneb-related protein, putative, expressed
TAIR PP10 AT3G11220.1 +2 9e-109 331 188/324 (58%) | Symbols: ELO1 | Paxneb protein-related | chr3:3513830-3515990 REVERSE LENGTH=355