MLOC_70394 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains18.925126.379322.914226.8647
LEAShoots from the seedlings (10 cm shoot stage)19.489216.247113.631115.2501
INF1Young developing inflorescences (5mm)44.420545.808142.570941.0433
INF2Developing inflorescences (1-1.5 cm)57.077448.369148.061662.2413
ROORoots from the seedlings (10 cm shoot stage)14.411722.950718.808430.2997
NODDeveloping tillers at six leaf stage, 3rd internode11.381711.887212.578645.411
CAR5Developing grain, bracts removed (5 DPA)28.143327.864527.469530.9053
CAR15Developing grain, bracts removed (15 DPA)13.716412.186213.236133.2847



CDS Structure of MLOC_70394






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70394.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363218NoneNoneNoneNone
MLOC_70394.1CUST_5893_PI427708080AvailableAvailablecontig_57893 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g22260.1 +2 0.0 1200 632/697 (91%) 13105.m02251 protein crooked neck, putative, expressed
TAIR PP10 AT5G41770.1 +2 0.0 981 500/697 (72%) crooked neck protein, putative / cell cycle protein, putative | chr5:16718021-16720936 FORWARD LENGTH=705