MLOC_70356 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3083430.362440.3485310.415684
LEAShoots from the seedlings (10 cm shoot stage)1.3015.55951.245182.57172
INF1Young developing inflorescences (5mm)1.013171.842270.8716931.29188
INF2Developing inflorescences (1-1.5 cm)1.343821.728181.912712.1557
ROORoots from the seedlings (10 cm shoot stage)2.484443.156045.420194.58658
NODDeveloping tillers at six leaf stage, 3rd internode14.924710.000814.292235.5084
CAR5Developing grain, bracts removed (5 DPA)80.020384.792287.217899.191
CAR15Developing grain, bracts removed (15 DPA)4.033944.930024.0152312.2587



CDS Structure of MLOC_70356






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70356.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_70356.1CUST_9441_PI427708083AvailableAvailablecontig_57825 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g53850.1 -2 1e-102 311 156/207 (75%) 13104.m05558 protein leucoanthocyanidin reductase, putative, expressed
TAIR PP10 AT1G61720.1 -2 3e-64 211 105/194 (54%) | Symbols: BAN | NAD(P)-binding Rossmann-fold superfamily protein | chr1:22791326-22792757 REVERSE LENGTH=340