MLOC_70320 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.560092.679923.292822.99429
LEAShoots from the seedlings (10 cm shoot stage)0.06684560.2308930.2962180.203408
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)00.032364800.0533731
ROORoots from the seedlings (10 cm shoot stage)14.11870.6862961.744272.82106
NODDeveloping tillers at six leaf stage, 3rd internode000.02193080.0499791
CAR5Developing grain, bracts removed (5 DPA)00.037843800.0488327
CAR15Developing grain, bracts removed (15 DPA)0.03201070.036799400.152287



CDS Structure of MLOC_70320






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70320.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365570NoneNoneNoneNone
MLOC_70320.1CUST_5888_PI427708080AvailableAvailablecontig_57772 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g38710.1 -2 1e-83 259 143/210 (68%) 13110.m03526 protein glutathione S-transferase, putative, expressed
TAIR PP10 AT1G10370.1 -2 3e-52 177 100/212 (47%) | Symbols: GST30, ATGSTU17, GST30B, ERD9 | Glutathione S-transferase family protein | chr1:3397274-3398273 REVERSE LENGTH=227