MLOC_70309 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.902314.885114.886512.6456
LEAShoots from the seedlings (10 cm shoot stage)9.004563.666613.206674.44539
INF1Young developing inflorescences (5mm)23.834725.55629.556319.0848
INF2Developing inflorescences (1-1.5 cm)22.801125.09326.358123.6599
ROORoots from the seedlings (10 cm shoot stage)5.28918.9425610.39939.11505
NODDeveloping tillers at six leaf stage, 3rd internode6.025045.863353.3854716.5382
CAR5Developing grain, bracts removed (5 DPA)15.370915.915716.300613.3894
CAR15Developing grain, bracts removed (15 DPA)5.211243.838334.980939.16254



CDS Structure of MLOC_70309






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70309.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357328NoneNoneNoneNone
MLOC_70309.2CUST_5885_PI427708080AvailableAvailablecontig_57758 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g31480.2 -1 0.0 1000 501/607 (83%) 13105.m03231 protein methyltransferase, putative, expressed
TAIR PP10 AT5G04060.1 -1 0.0 789 373/576 (65%) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr5:1099271-1101810 FORWARD LENGTH=600