MLOC_70298 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.851248.200059.06887.65278
LEAShoots from the seedlings (10 cm shoot stage)8.960487.53236.849426.12446
INF1Young developing inflorescences (5mm)7.393898.615488.304546.7015
INF2Developing inflorescences (1-1.5 cm)5.934175.721487.412766.74478
ROORoots from the seedlings (10 cm shoot stage)5.376796.586736.523487.06653
NODDeveloping tillers at six leaf stage, 3rd internode8.943783.960516.6104112.7854
CAR5Developing grain, bracts removed (5 DPA)5.682427.242416.705496.50954
CAR15Developing grain, bracts removed (15 DPA)1.768652.24452.226864.75132



CDS Structure of MLOC_70298






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70298.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_70298.1NoneAvailableAvailablecontig_57742 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g52710.3 +3 1e-36 135 76/116 (66%) 13104.m05415 protein imidazoleglycerol-phosphate dehydratase, putative, expressed
TAIR PP10 AT3G22425.1 +3 9e-19 86 51/119 (43%) | Symbols: IGPD, HISN5A | imidazoleglycerol-phosphate dehydratase | chr3:7951110-7952537 FORWARD LENGTH=264