MLOC_70277 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.092522.846220.55621.5552
LEAShoots from the seedlings (10 cm shoot stage)24.947322.920722.001620.9169
INF1Young developing inflorescences (5mm)39.843445.742839.571636.6298
INF2Developing inflorescences (1-1.5 cm)44.211551.584338.888653.0109
ROORoots from the seedlings (10 cm shoot stage)9.2955420.697312.804223.9517
NODDeveloping tillers at six leaf stage, 3rd internode12.649616.008315.866253.851
CAR5Developing grain, bracts removed (5 DPA)23.824522.515223.66923.8374
CAR15Developing grain, bracts removed (15 DPA)7.23927.277046.9797617.5303



CDS Structure of MLOC_70277






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70277.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360009NoneNoneNoneNone
MLOC_70277.1CUST_5877_PI427708080AvailableAvailablecontig_5772 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g51020.1 +2 0.0 1764 978/1119 (87%) 13103.m05547 protein expressed protein
TAIR PP10 AT1G73460.1 +2 0.0 1019 630/1175 (54%) Protein kinase superfamily protein | chr1:27620122-27624899 FORWARD LENGTH=1169