MLOC_70274 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains101.638110.962108.26693.9171
LEAShoots from the seedlings (10 cm shoot stage)98.144370.47475.652165.5972
INF1Young developing inflorescences (5mm)107.412108.871100.63875.248
INF2Developing inflorescences (1-1.5 cm)77.655391.496288.443882.6284
ROORoots from the seedlings (10 cm shoot stage)62.565799.451391.8887100.943
NODDeveloping tillers at six leaf stage, 3rd internode62.969745.339240.6714153.822
CAR5Developing grain, bracts removed (5 DPA)134.599128.477128.81110.721
CAR15Developing grain, bracts removed (15 DPA)78.361274.811765.06141.899



CDS Structure of MLOC_70274






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70274.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_70274.1CUST_15515_PI427708080AvailableAvailablecontig_57715 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g20220.1 +3 1e-143 428 232/261 (89%) 13104.m01860 protein elongation factor Tu, putative, expressed
TAIR PP10 AT1G18070.2 +3 5e-113 348 180/251 (72%) Translation elongation factor EF1A/initiation factor IF2gamma family protein | chr1:6214236-6218211 REVERSE LENGTH=532