MLOC_70246 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.593674.326434.297794.21078
LEAShoots from the seedlings (10 cm shoot stage)2.325482.248411.433651.85366
INF1Young developing inflorescences (5mm)10.778.658326.864977.73827
INF2Developing inflorescences (1-1.5 cm)7.758069.148096.926569.56992
ROORoots from the seedlings (10 cm shoot stage)1.244233.197432.822324.01556
NODDeveloping tillers at six leaf stage, 3rd internode2.429473.092586.0393413.4092
CAR5Developing grain, bracts removed (5 DPA)7.222796.943888.187767.84605
CAR15Developing grain, bracts removed (15 DPA)1.258051.725021.613173.54781



CDS Structure of MLOC_70246






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70246.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370635NoneNoneNoneNone
MLOC_70246.1CUST_5871_PI427708080AvailableAvailablecontig_5767 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g48700.1 +3 0.0 934 564/900 (63%) 13107.m05220 protein expressed protein
TAIR PP10 AT2G39300.2 +3 1e-93 321 244/738 (33%) unknown protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55060.1). | chr2:16410109-16412869 REVERSE LENGTH=837