- Predicted Gene MLOC_70229
MLOC_70229 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 19.6392 | 26.3949 | 24.1851 | 20.646 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 22.882 | 17.7575 | 13.8894 | 13.8048 |
| INF1 | Young developing inflorescences (5mm) | 47.5302 | 51.4313 | 52.087 | 36.5549 |
| INF2 | Developing inflorescences (1-1.5 cm) | 66.8697 | 71.2701 | 62.6085 | 64.0768 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 17.1182 | 23.1213 | 20.3234 | 21.8571 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 24.816 | 23.1757 | 20.7497 | 64.8253 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 36.7271 | 31.5487 | 35.3244 | 28.1313 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 16.4185 | 16.9323 | 16.7259 | 33.4672 |
CDS Structure of MLOC_70229
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_70229.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g38980.3 |
+3 |
0.0 |
669 |
335/382 (88%) |
13110.m03554 protein expressed protein |
| TAIR PP10 |
AT2G30700.1 |
+3 |
2e-120 |
373 |
205/419 (49%) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G61900.1); Has 68 Blast hits to 67 proteins in 13 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:13082033-13084384 REVERSE LENGTH=480 |