MLOC_70206 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.290428.585164.85656.84214
LEAShoots from the seedlings (10 cm shoot stage)7.161055.163524.982094.91834
INF1Young developing inflorescences (5mm)7.681358.806665.747996.22167
INF2Developing inflorescences (1-1.5 cm)6.276727.840765.599877.28532
ROORoots from the seedlings (10 cm shoot stage)3.548785.658052.645296.15954
NODDeveloping tillers at six leaf stage, 3rd internode7.9274310.41184.1311130.03
CAR5Developing grain, bracts removed (5 DPA)4.228315.493122.81533.91303
CAR15Developing grain, bracts removed (15 DPA)1.889962.924421.814624.85613



CDS Structure of MLOC_70206






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70206.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_70206.1NoneAvailableAvailablecontig_57583 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g22864.2 +3 3e-24 100 45/50 (90%) 13108.m02337 protein sec8 exocyst complex component specific domain containing protein, expressed
TAIR PP10 AT3G10380.1 +3 6e-13 66 29/54 (54%) | Symbols: SEC8, ATSEC8 | subunit of exocyst complex 8 | chr3:3219922-3228356 REVERSE LENGTH=1053