MLOC_70194 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains47.39344.609456.036440.5866
LEAShoots from the seedlings (10 cm shoot stage)35.017527.581932.165724.2326
INF1Young developing inflorescences (5mm)40.806545.159942.994330.7143
INF2Developing inflorescences (1-1.5 cm)38.387336.05737.654734.0865
ROORoots from the seedlings (10 cm shoot stage)88.790665.763176.559471.967
NODDeveloping tillers at six leaf stage, 3rd internode58.775777.22977.0811225.097
CAR5Developing grain, bracts removed (5 DPA)33.350733.014233.868126.4893
CAR15Developing grain, bracts removed (15 DPA)9.981789.0479911.422218.9833



CDS Structure of MLOC_70194






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70194.5
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359166NoneNoneNoneNone
MLOC_70194.5CUST_5867_PI427708080AvailableAvailablecontig_57567 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g13870.3 +1 5e-172 492 267/312 (86%) 13109.m01279 protein lipid phosphatase protein, putative, expressed
TAIR PP10 AT1G15080.1 +1 1e-129 383 198/282 (70%) | Symbols: ATPAP2, ATLPP2, LPP2 | lipid phosphate phosphatase 2 | chr1:5188080-5189476 FORWARD LENGTH=290