MLOC_7019 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 24.8535 | 21.18 | 18.6549 | 23.4821 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 15.3664 | 12.2497 | 14.8354 | 12.9149 |
| INF1 | Young developing inflorescences (5mm) | 38.227 | 41.8354 | 44.8847 | 39.2472 |
| INF2 | Developing inflorescences (1-1.5 cm) | 41.0302 | 45.4869 | 41.0303 | 49.6897 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 27.3202 | 21.2963 | 21.3057 | 29.017 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 5.53471 | 11.7989 | 13.7256 | 39.9259 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 26.3697 | 28.5851 | 29.9952 | 29.4305 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 14.1737 | 12.2043 | 13.0355 | 32.4472 |
CDS Structure of MLOC_7019
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_7019.5
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g50890.1 |
-3 |
5e-83 |
257 |
174/202 (86%) |
13106.m05473 protein RNA recognition motif containing protein, expressed |
| TAIR PP10 |
AT4G35785.1 |
-3 |
5e-32 |
122 |
71/100 (71%) |
RNA-binding (RRM/RBD/RNP motifs) family protein | chr4:16953211-16955127 REVERSE LENGTH=238 |
