MLOC_70189 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains52.29838.046843.09843.3548
LEAShoots from the seedlings (10 cm shoot stage)55.506222.709828.953729.7756
INF1Young developing inflorescences (5mm)2.574674.603692.506223.11427
INF2Developing inflorescences (1-1.5 cm)2.924861.550911.723262.39096
ROORoots from the seedlings (10 cm shoot stage)102.709106.15863.4633116.347
NODDeveloping tillers at six leaf stage, 3rd internode535.592666.6642.331771543.69
CAR5Developing grain, bracts removed (5 DPA)107.709128.177126.287125.921
CAR15Developing grain, bracts removed (15 DPA)31.07843.75340.654298.4161



CDS Structure of MLOC_70189






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70189.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_70189.1CUST_15505_PI427708080AvailableAvailablecontig_57558 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g40720.1 -1 3e-156 448 207/239 (87%) 13110.m03775 protein expansin precursor, putative, expressed
TAIR PP10 AT1G65680.1 -1 6e-75 239 122/237 (51%) | Symbols: ATEXPB2, EXPB2, ATHEXP BETA 1.4 | expansin B2 | chr1:24427266-24428399 FORWARD LENGTH=273