MLOC_70177 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.056744.30036.47834.38911
LEAShoots from the seedlings (10 cm shoot stage)4.289881.960063.757952.38743
INF1Young developing inflorescences (5mm)7.016116.520117.365894.32899
INF2Developing inflorescences (1-1.5 cm)3.396584.69354.736093.44706
ROORoots from the seedlings (10 cm shoot stage)8.392235.699676.655725.71622
NODDeveloping tillers at six leaf stage, 3rd internode6.186795.7985310.278517.1638
CAR5Developing grain, bracts removed (5 DPA)1.48171.857192.07641.21086
CAR15Developing grain, bracts removed (15 DPA)0.8340190.7670830.953291.38294



CDS Structure of MLOC_70177






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70177.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_70177.1CUST_13084_PI427708083AvailableAvailablecontig_5754 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g56800.1 +3 7e-14 74 34/41 (83%) 13104.m05923 protein peptidyl-prolyl cis-trans isomerase, putative, expressed
TAIR PP10 AT2G18040.1 +3 2e-11 64 29/41 (71%) | Symbols: PIN1AT | peptidylprolyl cis/trans isomerase, NIMA-interacting 1 | chr2:7842346-7843537 FORWARD LENGTH=119