- Predicted Gene MLOC_70143
MLOC_70143 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.679792 | 1.25165 | 0.789754 | 0.945455 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 6.82668 | 9.40977 | 8.52561 | 6.62121 |
INF1 | Young developing inflorescences (5mm) | 1.94916 | 2.23948 | 1.72934 | 1.61908 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.79412 | 1.98171 | 1.8913 | 1.9605 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.174366 | 0.455187 | 0.567891 | 0.481376 |
NOD | Developing tillers at six leaf stage, 3rd internode | 4.44953 | 5.09047 | 6.62665 | 17.0909 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.5695 | 2.97602 | 3.09056 | 2.93405 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.600993 | 0.549143 | 0.572525 | 1.2953 |
CDS Structure of MLOC_70143
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_70143.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g57410.3 |
+1 |
0.0 |
1018 |
509/606 (84%) |
13101.m15083 protein pentatricopeptide repeat domain containing protein, putative, expressed |
TAIR PP10 |
AT1G09900.1 |
+1 |
4e-128 |
400 |
194/522 (37%) |
Pentatricopeptide repeat (PPR-like) superfamily protein | chr1:3218133-3219929 FORWARD LENGTH=598 |