MLOC_70131 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains000.06271440.0501085
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)00.08351030.04569350.0676089
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.5171670.05510340.1230620.1541
NODDeveloping tillers at six leaf stage, 3rd internode00.1040930.07589680.44092
CAR5Developing grain, bracts removed (5 DPA)0.8134770.8583971.089061.03038
CAR15Developing grain, bracts removed (15 DPA)00.0741680.04585160.265621



CDS Structure of MLOC_70131






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70131.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_70131.1CUST_9419_PI427708083AvailableAvailablecontig_57489 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g29320.1 -2 9e-96 292 151/242 (62%) 13110.m02507 protein speckle-type POZ protein, putative, expressed
TAIR PP10 AT3G06190.1 -2 1e-58 197 105/235 (45%) | Symbols: ATBPM2, BPM2 | BTB-POZ and MATH domain 2 | chr3:1874577-1876575 REVERSE LENGTH=406