- Predicted Gene MLOC_70120
MLOC_70120 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 14.7323 | 73.923 | 58.9958 | 79.3719 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 89.5868 | 76.6277 | 45.9932 | 77.2536 |
| INF1 | Young developing inflorescences (5mm) | 165.921 | 129.47 | 106.619 | 135.422 |
| INF2 | Developing inflorescences (1-1.5 cm) | 169.21 | 166.901 | 129.987 | 222.003 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.76038 | 17.0637 | 12.0127 | 29.8534 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 18.0995 | 17.9543 | 14.5419 | 88.8298 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 57.3883 | 53.8482 | 55.269 | 72.2115 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 22.492 | 21.7719 | 18.7206 | 60.3646 |
CDS Structure of MLOC_70120
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_70120.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g48010.1 |
+1 |
4e-173 |
521 |
326/423 (77%) |
13102.m05420 protein nuclear matrix constituent protein 1-like, putative, expressed |
| TAIR PP10 |
AT1G67230.1 |
+1 |
1e-88 |
295 |
171/390 (44%) |
| Symbols: LINC1 | little nuclei1 | chr1:25151561-25156032 REVERSE LENGTH=1132 |