MLOC_7011 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 15.0273 | 13.0517 | 12.8707 | 13.2465 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 10.3779 | 7.04682 | 5.98552 | 6.46035 |
| INF1 | Young developing inflorescences (5mm) | 31.7751 | 43.4065 | 44.9838 | 32.3066 |
| INF2 | Developing inflorescences (1-1.5 cm) | 29.587 | 34.7045 | 27.245 | 33.2733 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 18.6823 | 16.6514 | 18.9848 | 19.9791 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 14.876 | 16.8578 | 36.6627 | 64.0197 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 32.9249 | 31.4943 | 36.049 | 31.9248 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 25.1699 | 27.768 | 26.3592 | 57.9179 |
CDS Structure of MLOC_7011
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_7011.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g49150.3 |
-3 |
8e-72 |
233 |
123/190 (65%) |
13102.m05562 protein RNA polymerase Rpb4, putative, expressed |
| TAIR PP10 |
AT4G15950.1 |
-3 |
2e-27 |
110 |
51/122 (42%) |
| Symbols: NRPD4, NRPE4, RDM2 | RNA polymerase II, Rpb4, core protein | chr4:9040743-9041994 FORWARD LENGTH=205 |
