MLOC_7010 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3875410.2182850.1448620.231097
LEAShoots from the seedlings (10 cm shoot stage)1.906630.4052751.600871.00188
INF1Young developing inflorescences (5mm)0.8156910.9653922.318021.11533
INF2Developing inflorescences (1-1.5 cm)1.021461.663730.759181.35945
ROORoots from the seedlings (10 cm shoot stage)0.4888360.3669180.268990.419606
NODDeveloping tillers at six leaf stage, 3rd internode00.076321900.433183
CAR5Developing grain, bracts removed (5 DPA)7.4257811.124610.5079.68613
CAR15Developing grain, bracts removed (15 DPA)2.146552.729012.803866.47139



CDS Structure of MLOC_7010






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_7010.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_7010.1CUST_13083_PI427708083AvailableAvailablecontig_138500 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g49140.1 +1 4e-40 144 65/77 (84%) 13102.m05561 protein glycosyltransferase, putative, expressed
TAIR PP10 AT2G22900.1 +1 4e-23 96 45/75 (60%) Galactosyl transferase GMA12/MNN10 family protein | chr2:9744359-9746193 REVERSE LENGTH=449