MLOC_70079 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains45.888838.253238.729943.8887
LEAShoots from the seedlings (10 cm shoot stage)28.931620.047927.240722.8049
INF1Young developing inflorescences (5mm)61.377461.685561.053157.4506
INF2Developing inflorescences (1-1.5 cm)56.334561.575459.05171.5727
ROORoots from the seedlings (10 cm shoot stage)40.682240.244536.569153.072
NODDeveloping tillers at six leaf stage, 3rd internode13.920719.965930.048977.1877
CAR5Developing grain, bracts removed (5 DPA)39.030341.33744.050145.8858
CAR15Developing grain, bracts removed (15 DPA)11.258811.8589.1727628.2596



CDS Structure of MLOC_70079






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70079.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368502NoneNoneNoneNone
MLOC_70079.3CUST_5843_PI427708080AvailableAvailablecontig_57408 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g18510.1 -1 9e-175 500 269/305 (88%) 13103.m02218 protein expressed protein
TAIR PP10 AT2G40290.1 -1 2e-156 453 243/309 (79%) Eukaryotic translation initiation factor 2 subunit 1 | chr2:16829030-16830889 REVERSE LENGTH=344