- Predicted Gene MLOC_70077
MLOC_70077 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_70077_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_70077_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 1.34505 | 0.554882 | 0.632606 | 0.82752 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 4.87619 | 7.94152 | 6.31786 | 5.84993 |
INF1 | Young developing inflorescences (5mm) | 0.106615 | 0.0239619 | 0.0819479 | 0.0636498 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.489271 | 0.480617 | 0.993535 | 0.769281 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.84084 | 4.49471 | 0.957497 | 5.28146 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.302988 | 0.239938 | 0.230374 | 0.804692 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.08752 | 0.820282 | 0.806344 | 1.01176 |
CAR15 | Developing grain, bracts removed (15 DPA) | 19.6863 | 18.8213 | 16.2644 | 49.503 |
CDS Structure of MLOC_70077
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_70077.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g09850.1 |
+3 |
1e-177 |
511 |
277/361 (77%) |
13110.m00868 protein EF hand family protein, putative, expressed |
TAIR PP10 |
AT4G38810.2 |
+3 |
4e-129 |
386 |
207/361 (57%) |
Calcium-binding EF-hand family protein | chr4:18115607-18118860 REVERSE LENGTH=375 |