MLOC_70059 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.324370.30976600.262874
LEAShoots from the seedlings (10 cm shoot stage)2.874583.430832.002442.13415
INF1Young developing inflorescences (5mm)1.610911.684161.71511.29759
INF2Developing inflorescences (1-1.5 cm)1.862162.271422.776582.32127
ROORoots from the seedlings (10 cm shoot stage)0.8159371.681920.9262371.61432
NODDeveloping tillers at six leaf stage, 3rd internode2.014042.402982.472557.92872
CAR5Developing grain, bracts removed (5 DPA)0.4795670.4328620.5632930.463709
CAR15Developing grain, bracts removed (15 DPA)0.1233670.1181250.3990050.386053



CDS Structure of MLOC_70059






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70059.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354366NoneNoneNoneNone
MLOC_70059.2CUST_5842_PI427708080AvailableAvailablecontig_5737 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g36920.1 +2 2e-146 445 240/387 (62%) 13112.m03787 protein calmodulin binding protein, putative, expressed
TAIR PP10 AT4G25800.2 +2 9e-44 167 97/231 (42%) Calmodulin-binding protein | chr4:13125224-13127765 FORWARD LENGTH=601