- Predicted Gene MLOC_70058
MLOC_70058 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0 | 0.0636509 | 0.127515 | 0.0928726 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.113633 | 0.157041 | 0.0668253 | 0.0955661 |
| INF1 | Young developing inflorescences (5mm) | 0.121838 | 0.211222 | 0.231485 | 0.153595 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.424971 | 0.489473 | 0.522123 | 0.51457 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.0230311 | 0.0699593 | 0.0517811 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.166963 | 0.206178 | 0.246657 | 0.666403 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.0624074 | 0 | 0 | 0.0831738 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.108732 | 0.0906201 | 0.191769 | 0.266439 |
CDS Structure of MLOC_70058
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_70058.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g31620.1 |
+2 |
8e-22 |
98 |
71/194 (37%) |
13107.m03202 protein transposon protein, putative, Pong sub-class |
| TAIR PP10 |
AT2G13770.1 |
+2 |
6e-13 |
71 |
60/200 (30%) |
CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); Has 451 Blast hits to 352 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 8; Plants - 388; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). | chr2:5736603-5737847 FORWARD LENGTH=343 |