MLOC_70051 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.814362.710192.498783.3099
LEAShoots from the seedlings (10 cm shoot stage)16.1946.264335.589731.3905
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.02200780.02085530.2949750.12313
ROORoots from the seedlings (10 cm shoot stage)4.06873.926114.124765.4087
NODDeveloping tillers at six leaf stage, 3rd internode3.789482.2390410.669312.5903
CAR5Developing grain, bracts removed (5 DPA)0.3868680.1963920.2766910.324429
CAR15Developing grain, bracts removed (15 DPA)1.73132.41591.753155.7207



CDS Structure of MLOC_70051






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70051.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251340.1NoneNoneNoneNone
MLOC_70051.1CUST_5840_PI427708080AvailableAvailablecontig_57360 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g53850.1 -3 2e-124 371 208/335 (62%) 13104.m05558 protein leucoanthocyanidin reductase, putative, expressed
TAIR PP10 AT1G61720.1 -3 9e-77 247 146/327 (45%) | Symbols: BAN | NAD(P)-binding Rossmann-fold superfamily protein | chr1:22791326-22792757 REVERSE LENGTH=340