MLOC_70044 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.8045716.247516.299614.0857
LEAShoots from the seedlings (10 cm shoot stage)30.951718.87410.538917.8689
INF1Young developing inflorescences (5mm)64.87866.601768.692953.6657
INF2Developing inflorescences (1-1.5 cm)164.851113.199123.239144.199
ROORoots from the seedlings (10 cm shoot stage)3.244358.404669.585319.87235
NODDeveloping tillers at six leaf stage, 3rd internode13.61415.483214.97156.7342
CAR5Developing grain, bracts removed (5 DPA)6.96296.289736.180946.30251
CAR15Developing grain, bracts removed (15 DPA)12.582410.262311.338425.0817



CDS Structure of MLOC_70044






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70044.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_70044.2CUST_15489_PI427708080AvailableAvailablecontig_57338 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g55570.1 -1 0.0 1082 590/853 (69%) 13104.m05765 protein plant protein of unknown function DUF869 domain containing protein, expressed
TAIR PP10 AT2G23360.1 -1 4e-82 288 251/812 (31%) Plant protein of unknown function (DUF869) | chr2:9949420-9952727 FORWARD LENGTH=898