MLOC_7003 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.24539 | 1.57702 | 2.64517 | 2.28488 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 7.36835 | 7.15252 | 12.7359 | 7.90146 |
| INF1 | Young developing inflorescences (5mm) | 1.26721 | 0.98478 | 2.11031 | 1.28408 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.997008 | 1.20783 | 1.10796 | 1.35767 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 11.8154 | 4.33069 | 4.59947 | 6.7894 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.18434 | 0.818081 | 1.88318 | 3.43642 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.64358 | 1.98152 | 1.20013 | 1.7543 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.0269 | 2.58908 | 0.873029 | 4.8999 |
CDS Structure of MLOC_7003
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_7003.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g56540.1 |
-1 |
5e-65 |
203 |
101/111 (91%) |
13103.m06170 protein heat shock protein DnaJ, putative, expressed |
| TAIR PP10 |
AT5G03030.1 |
-1 |
3e-47 |
157 |
72/107 (67%) |
Chaperone DnaJ-domain superfamily protein | chr5:708479-709513 REVERSE LENGTH=112 |
