MLOC_70022 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.984064.708714.053593.80199
LEAShoots from the seedlings (10 cm shoot stage)2.027340.7028711.147431.09667
INF1Young developing inflorescences (5mm)12.335411.95419.348178.78411
INF2Developing inflorescences (1-1.5 cm)8.874749.990237.72049.11353
ROORoots from the seedlings (10 cm shoot stage)1.522612.68092.078812.65989
NODDeveloping tillers at six leaf stage, 3rd internode0.3757010.6170160.927332.02818
CAR5Developing grain, bracts removed (5 DPA)4.089193.694693.740533.36191
CAR15Developing grain, bracts removed (15 DPA)0.7149750.3546330.7553951.24665



CDS Structure of MLOC_70022






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_70022.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_70022.3CUST_15486_PI427708080AvailableAvailablecontig_57313 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g42040.1 -2 0.0 1211 738/1019 (72%) 13103.m04524 protein HEAT repeat family protein, putative, expressed
TAIR PP10 AT1G64960.1 -2 1e-158 519 397/1032 (38%) ARM repeat superfamily protein | chr1:24129918-24134049 FORWARD LENGTH=1203