- Predicted Gene MLOC_70006
MLOC_70006 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 25.5863 | 16.2745 | 17.0217 | 17.1729 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 18.1493 | 35.8201 | 41.9486 | 22.3163 |
| INF1 | Young developing inflorescences (5mm) | 14.3922 | 16.2529 | 17.9458 | 13.5824 |
| INF2 | Developing inflorescences (1-1.5 cm) | 16.3382 | 15.4419 | 17.4651 | 17.2286 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 42.0403 | 32.8607 | 27.8261 | 32.4888 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 25.9123 | 20.1822 | 30.7289 | 50.7659 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 24.2807 | 27.9339 | 24.671 | 23.9008 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.67997 | 5.1798 | 6.58918 | 13.6699 |
CDS Structure of MLOC_70006
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_70006.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g08564.1 |
+3 |
2e-41 |
140 |
63/74 (85%) |
13106.m00899 protein OsRCI2-8 - Putative low temperature and salt responsive protein, expressed |
| TAIR PP10 |
AT2G24040.1 |
+3 |
1e-21 |
87 |
37/56 (66%) |
Low temperature and salt responsive protein family | chr2:10224028-10224531 FORWARD LENGTH=75 |