MLOC_69959 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0.03836750.02151680.007840210.0506704
CAR5Developing grain, bracts removed (5 DPA)0.416090.1849710.2720030.30664
CAR15Developing grain, bracts removed (15 DPA)0.02091460.024394900.0778623



CDS Structure of MLOC_69959






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69959.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_69959.1CUST_15472_PI427708080AvailableAvailablecontig_57224 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g38560.1 +2 0.0 754 373/442 (84%) 13104.m03703 protein pectinesterase, putative, expressed
TAIR PP10 AT3G05610.1 +2 6e-99 316 168/414 (41%) Plant invertase/pectin methylesterase inhibitor superfamily | chr3:1625876-1627976 REVERSE LENGTH=669