MLOC_69944 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains798.682557.483526.238607.818
LEAShoots from the seedlings (10 cm shoot stage)267.464166.991232.079181.495
INF1Young developing inflorescences (5mm)806.839804.961806.492711.219
INF2Developing inflorescences (1-1.5 cm)531.579498.943544.415566.096
ROORoots from the seedlings (10 cm shoot stage)609.061569.654612.05652.462
NODDeveloping tillers at six leaf stage, 3rd internode66.93759.0117127.243206.438
CAR5Developing grain, bracts removed (5 DPA)402.019445.217413.916407.006
CAR15Developing grain, bracts removed (15 DPA)171.312170.501143.995400.815



CDS Structure of MLOC_69944






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69944.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250205.1NoneNoneNoneNone
MLOC_69944.1CUST_5831_PI427708080AvailableAvailablecontig_57197 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g39960.3 +3 5e-41 142 81/83 (98%) 13105.m04215 protein 40S ribosomal protein S26, putative, expressed
TAIR PP10 AT3G56340.1 +3 5e-33 120 69/83 (83%) Ribosomal protein S26e family protein | chr3:20892309-20893343 REVERSE LENGTH=130