MLOC_69930 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains581.242368.162434.0010
LEAShoots from the seedlings (10 cm shoot stage)602.476164.382330.9960
INF1Young developing inflorescences (5mm)212.254236.73232.3050
INF2Developing inflorescences (1-1.5 cm)223.514265.916256.9830
ROORoots from the seedlings (10 cm shoot stage)1088.74562.754500.9090
NODDeveloping tillers at six leaf stage, 3rd internode4107.15-14276.770
CAR5Developing grain, bracts removed (5 DPA)490.46518.687490.3210
CAR15Developing grain, bracts removed (15 DPA)92.985999.249107.1860



CDS Structure of MLOC_69930






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69930.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356463NoneNoneNoneNone
MLOC_69930.1CUST_5827_PI427708080AvailableNonecontig_57177 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g14220.1 -1 0.0 833 429/432 (99%) 13111.m01455 protein tubulin/FtsZ domain containing protein, putative, expressed
TAIR PP10 AT4G14960.2 -1 0.0 828 423/432 (98%) | Symbols: TUA6 | Tubulin/FtsZ family protein | chr4:8548769-8550319 REVERSE LENGTH=450