MLOC_69909 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.011158.723118.074048.67476
LEAShoots from the seedlings (10 cm shoot stage)2.372380.3991920.4975731.01356
INF1Young developing inflorescences (5mm)25.299323.052519.746720.867
INF2Developing inflorescences (1-1.5 cm)18.878326.003116.67325.7046
ROORoots from the seedlings (10 cm shoot stage)1.125884.166543.063325.20975
NODDeveloping tillers at six leaf stage, 3rd internode0.1778630.2129980.08043330.702488
CAR5Developing grain, bracts removed (5 DPA)7.990718.493238.427978.96177
CAR15Developing grain, bracts removed (15 DPA)0.5155650.1842350.6361551.0128



CDS Structure of MLOC_69909






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69909.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_69909.1CUST_15466_PI427708080AvailableAvailablecontig_5715 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g07050.1 -2 0.0 1063 648/1200 (54%) 13111.m00728 protein FHA domain containing protein, putative, expressed
TAIR PP10 AT1G34355.1 -2 4e-55 211 159/464 (34%) | Symbols: ATPS1, PS1 | forkhead-associated (FHA) domain-containing protein | chr1:12536497-12541730 FORWARD LENGTH=1477