MLOC_69904 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains22.374628.844329.903121.6995
LEAShoots from the seedlings (10 cm shoot stage)32.921630.217726.993520.5026
INF1Young developing inflorescences (5mm)11.092412.056512.10438.37005
INF2Developing inflorescences (1-1.5 cm)17.125415.271313.328514.5311
ROORoots from the seedlings (10 cm shoot stage)34.202234.670829.201130.6092
NODDeveloping tillers at six leaf stage, 3rd internode29.33915.951419.836140.6761
CAR5Developing grain, bracts removed (5 DPA)25.887424.29624.694519.9888
CAR15Developing grain, bracts removed (15 DPA)15.620914.855415.172332.6013



CDS Structure of MLOC_69904






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69904.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_69904.2CUST_13075_PI427708083AvailableAvailablecontig_57140 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g39220.1 +1 3e-85 269 125/138 (91%) 13110.m03590 protein tobamovirus multiplication protein, putative, expressed
TAIR PP10 AT2G02180.1 +1 2e-74 240 109/137 (80%) | Symbols: TOM3 | tobamovirus multiplication protein 3 | chr2:560976-562961 FORWARD LENGTH=303