MLOC_69900 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.448713.872273.314153.36923
LEAShoots from the seedlings (10 cm shoot stage)7.354954.14645.627384.30251
INF1Young developing inflorescences (5mm)3.025612.677792.826692.03421
INF2Developing inflorescences (1-1.5 cm)2.467832.664112.445872.35445
ROORoots from the seedlings (10 cm shoot stage)0.5683810.9832781.02120.862622
NODDeveloping tillers at six leaf stage, 3rd internode0.4591360.8693641.041712.32511
CAR5Developing grain, bracts removed (5 DPA)2.16342.424332.443331.83899
CAR15Developing grain, bracts removed (15 DPA)0.1807580.2618060.2635210.431534



CDS Structure of MLOC_69900






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69900.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_69900.2CUST_13074_PI427708083AvailableAvailablecontig_57133 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g36860.1 -3 1e-36 143 78/110 (71%) 13110.m03346 protein CRS1/YhbY domain containing protein, expressed
TAIR PP10 AT2G21350.1 -3 4e-13 71 33/56 (59%) RNA-binding CRS1 / YhbY (CRM) domain protein | chr2:9136451-9137267 REVERSE LENGTH=222