MLOC_69899 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.19617.438949.371198.70646
LEAShoots from the seedlings (10 cm shoot stage)8.688561.342254.286413.74558
INF1Young developing inflorescences (5mm)0.645620.4263180.5461440.486683
INF2Developing inflorescences (1-1.5 cm)0.2842890.3250740.3376750.371695
ROORoots from the seedlings (10 cm shoot stage)3.631685.071893.646185.19968
NODDeveloping tillers at six leaf stage, 3rd internode57.22858.87472.93615107.266
CAR5Developing grain, bracts removed (5 DPA)0.4200290.2620190.3530320.354578
CAR15Developing grain, bracts removed (15 DPA)0.056000800.02000290.109734



CDS Structure of MLOC_69899






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69899.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360554NoneNoneNoneNone
MLOC_69899.1CUST_5824_PI427708080AvailableAvailablecontig_57132 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g38420.1 +2 0.0 918 468/551 (85%) 13105.m04029 protein laccase precursor protein, putative, expressed
TAIR PP10 AT5G60020.1 +2 0.0 779 389/556 (70%) | Symbols: LAC17, ATLAC17 | laccase 17 | chr5:24168072-24170223 FORWARD LENGTH=577