MLOC_69891 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.419695.5325.839225.90994
LEAShoots from the seedlings (10 cm shoot stage)93.382157.15148.244106.13
INF1Young developing inflorescences (5mm)16.769915.854215.898914.4393
INF2Developing inflorescences (1-1.5 cm)8.311697.9848610.101510.2093
ROORoots from the seedlings (10 cm shoot stage)0.2406731.561193.187291.821
NODDeveloping tillers at six leaf stage, 3rd internode46.046452.326778.3554168.04
CAR5Developing grain, bracts removed (5 DPA)31.215932.123934.102834.486
CAR15Developing grain, bracts removed (15 DPA)2.45052.78072.629196.80899



CDS Structure of MLOC_69891






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69891.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354856NoneNoneNoneNone
MLOC_69891.2CUST_18389_PI427708080AvailableAvailablecontig_56970 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g49680.1 +3 3e-146 432 268/332 (81%) 13102.m05632 protein arsenate reductase, putative, expressed
TAIR PP10 AT5G23060.1 +3 3e-99 310 171/278 (62%) | Symbols: CaS | calcium sensing receptor | chr5:7736760-7738412 REVERSE LENGTH=387