MLOC_69867 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.539387.47357.65667.08453
LEAShoots from the seedlings (10 cm shoot stage)8.111191.987832.963713.48628
INF1Young developing inflorescences (5mm)7.405335.767846.384635.55196
INF2Developing inflorescences (1-1.5 cm)14.691212.736112.49514.4809
ROORoots from the seedlings (10 cm shoot stage)9.214285.841756.318426.4954
NODDeveloping tillers at six leaf stage, 3rd internode11.4549.6976813.785127.3474
CAR5Developing grain, bracts removed (5 DPA)2.401392.425762.166572.22254
CAR15Developing grain, bracts removed (15 DPA)0.1267730.1987940.1989940.413868



CDS Structure of MLOC_69867






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69867.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368587NoneNoneNoneNone
MLOC_69867.1CUST_5819_PI427708080AvailableAvailablecontig_57081 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g19200.1 -1 0.0 706 435/479 (91%) 13103.m02294 protein DNAJ heat shock N-terminal domain-containing protein, putative, expressed
TAIR PP10 AT4G02100.1 -1 3e-127 404 273/572 (48%) Heat shock protein DnaJ with tetratricopeptide repeat | chr4:930228-932049 FORWARD LENGTH=546