MLOC_69825 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.838192.441332.865623.06057
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.09682380.0744360.09318380.105969
ROORoots from the seedlings (10 cm shoot stage)5.181673.517262.281424.12832
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0.02399640.022895600.0261819
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_69825






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69825.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363576NoneNoneNoneNone
MLOC_69825.1CUST_5814_PI427708080AvailableAvailablecontig_57012 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g02230.1 +1 0.0 822 406/557 (73%) 13108.m00160 protein FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed
TAIR PP10 AT1G32300.1 +1 0.0 598 298/567 (53%) D-arabinono-1,4-lactone oxidase family protein | chr1:11651342-11653365 FORWARD LENGTH=595