MLOC_69821 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.131795000.204575
LEAShoots from the seedlings (10 cm shoot stage)0.1039870.1116110.2950410.157999
INF1Young developing inflorescences (5mm)0.2244530.1181610.2756450.177995
INF2Developing inflorescences (1-1.5 cm)0.5162370.8138680.471610.743298
ROORoots from the seedlings (10 cm shoot stage)0.1187180.0687190.5785850.182064
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)000.0848150.124722



CDS Structure of MLOC_69821






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69821.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_69821.2CUST_9378_PI427708083AvailableAvailablecontig_5700 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g10640.1 -2 1e-49 141 69/100 (69%) 13104.m00956 protein amidase family protein, putative
TAIR PP10 AT4G34880.1 -2 8e-36 112 55/100 (55%) Amidase family protein | chr4:16615549-16617424 FORWARD LENGTH=466