MLOC_69818 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains19.854121.665420.484623.0336
LEAShoots from the seedlings (10 cm shoot stage)12.809516.310614.916813.435
INF1Young developing inflorescences (5mm)46.250538.3535.003635.8578
INF2Developing inflorescences (1-1.5 cm)30.214326.198631.341733.3841
ROORoots from the seedlings (10 cm shoot stage)7.8560517.312217.901321.423
NODDeveloping tillers at six leaf stage, 3rd internode2.37572.060876.3494210.0509
CAR5Developing grain, bracts removed (5 DPA)22.976222.649924.790824.8523
CAR15Developing grain, bracts removed (15 DPA)10.3089.048238.7465123.6184



CDS Structure of MLOC_69818






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69818.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355460NoneNoneNoneNone
MLOC_69818.1CUST_5813_PI427708080AvailableAvailablecontig_56998 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g22350.1 +2 7e-170 488 255/298 (86%) 13103.m02686 protein Brix domain containing protein, putative, expressed
TAIR PP10 AT5G61770.1 +2 9e-114 343 181/289 (63%) | Symbols: PPAN | PETER PAN-like protein | chr5:24815888-24817495 FORWARD LENGTH=345